10月下半月circRNA研究報道匯總
歡迎各位來到“circRNA研究報道匯總”欄目,本期從pubmed中檢索收集最新發(fā)布的circRNA文獻(xiàn)23篇,下面我們一起來看看circRNA研究有哪些新進(jìn)展。
1、長鏈非編碼RNA:LINC-PINT來源的circRNA編碼多肽抑制膠質(zhì)母細(xì)胞瘤中的癌基因轉(zhuǎn)錄延伸
論文標(biāo)題:A peptide encoded by circular form of LINC-PINT suppresses oncogenic transcriptional elongation in glioblastoma
雜志:Nat Commun.?影響因子:12.353
通訊作者單位:中山大學(xué)附屬第一醫(yī)院
環(huán)狀RNA種類功能都具有多樣性,關(guān)于環(huán)狀RNA直接翻譯蛋白或多肽調(diào)控細(xì)胞功能已有多篇報道。本研究前期通過高通量轉(zhuǎn)錄組和翻譯組測序分析發(fā)現(xiàn)長非編碼RNA LINC-PINT的2號外顯子可單獨(dú)形成Circ-PINT的環(huán)狀RNA,Circ-PINT包含一個完整的開放閱讀框,可能編碼多肽,進(jìn)一步通過制備針對該多肽的特異性抗體并結(jié)合CRISPR/cas9基因敲除細(xì)胞株等實(shí)驗(yàn),證實(shí)Circ-PINT可通過核糖體進(jìn)入位點(diǎn)序列IRES翻譯出87個氨基酸組成的全新多肽PINT87aa通過結(jié)合聚合酶相關(guān)因子復(fù)合物基因PAF1,抑制多種癌基因的轉(zhuǎn)錄延伸,進(jìn)而抑制惡性膠質(zhì)瘤的發(fā)生和進(jìn)展,細(xì)胞功能實(shí)驗(yàn)表明PINT87aa通過結(jié)合聚合酶相關(guān)因子復(fù)合物基因PAF1,抑制多種癌基因的轉(zhuǎn)錄延伸,進(jìn)而抑制惡性膠質(zhì)瘤的發(fā)生和進(jìn)展,體內(nèi)動物實(shí)驗(yàn),在小鼠腦部原位以及皮下成瘤實(shí)驗(yàn)中過表達(dá)PINT87aa蛋白的腫瘤細(xì)胞,成瘤能力大大減弱,動物生存期延長,而基因敲除低成瘤細(xì)胞中circ-PINT的編碼區(qū)的部分序列后,動物的成瘤能力得到增強(qiáng),證實(shí)環(huán)狀RNA circ-PINT翻譯的多肽具有抑制腫瘤的作用。該研究結(jié)果提示環(huán)狀RNA編碼的多肽產(chǎn)物可能在惡性腫瘤診斷、預(yù)后及靶向治療方面具有重要的研究意義,該文詳細(xì)解讀見往期文章Nature Communications:長非編碼RNA形成環(huán)狀RNA翻譯功能性多肽。

圖注:證實(shí)Circ-PINT翻譯全新多肽PINT87aa的系列實(shí)驗(yàn)
2、環(huán)狀RNA-circAGO2通過HuR阻止AGO2-miRNA復(fù)合物形成維持靶基因穩(wěn)定性促進(jìn)腫瘤進(jìn)展
論文標(biāo)題:Circular RNA circAGO2 drives cancer progression through facilitating HuR-repressed functions of AGO2-miRNA complexes
雜志:Cell Death Differ.?影響因子:8
通訊作者單位:華中科技大學(xué)同濟(jì)醫(yī)學(xué)院
Argonaute 2(AGO2)是microRNA(miRNA)誘導(dǎo)的沉默復(fù)合物的核心成分,在腫瘤發(fā)生和侵襲性中起著重要作用。然而,調(diào)節(jié)AGO2在癌癥中功能的機(jī)制仍然難以捉摸。在該研究中,研究者鑒定了由AGO2基因產(chǎn)生的一個內(nèi)含子來源的環(huán)狀RNA(circAGO2)在AGO2-miRNA復(fù)合物和癌癥進(jìn)展中起新型調(diào)控功能。CircAGO2在胃癌,結(jié)腸癌,前列腺癌和神經(jīng)母細(xì)胞瘤中上調(diào),并且與患者預(yù)后不良有關(guān)。CircAGO2在體外和體內(nèi)實(shí)驗(yàn)中可促進(jìn)癌細(xì)胞的生長,侵襲和轉(zhuǎn)移。機(jī)理研究表明,circAGO2與人類抗原R(HuR)蛋白直接相互作用,circAGO2促進(jìn)HuR在靶基因3’UTR區(qū)的活化和富集,從而減少AGO2結(jié)合miRNA和抑制AGO2/miRNA介導(dǎo)的基因沉默。在胃癌細(xì)胞中穩(wěn)定干擾circAGO2后可抑制腫瘤細(xì)胞增殖和侵襲能力,皮下成瘤實(shí)驗(yàn)也表明干擾circAGO2后AGS細(xì)胞成瘤減弱,尾靜脈注射sh-circAGO2細(xì)胞后腫瘤遷移能力下降。進(jìn)一步基于HuR與circAGO2相互作用的分子模擬,設(shè)計(jì)了可阻斷該相互作用的小肽HIP-13,實(shí)驗(yàn)表明該多肽能有效競爭性結(jié)合內(nèi)源circAGO2,阻礙其與HuR的結(jié)合并抑制腫瘤遷移作用。這些實(shí)驗(yàn)結(jié)果表明circAGO2通過直接結(jié)合HuR抑制AGO2-miRNA復(fù)合物形成進(jìn)而驅(qū)動癌癥進(jìn)展,為circRNA功能機(jī)制研究提供了新視角。該文詳細(xì)解讀見往期文章:Cell Death & Differentiation連發(fā)兩篇circRNA研究論文。

圖注:體內(nèi)外實(shí)驗(yàn)證實(shí)circAGO2可促進(jìn)胃癌細(xì)胞增殖和遷移
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3、人造circRNA海綿樣吸附miR-21抑制胃癌細(xì)胞增殖
論文標(biāo)題:Synthetic Circular RNA Functions as a miR-21 Sponge to Suppress Gastric Carcinoma Cell Proliferation
雜志:Mol Ther Nucleic Acids. 影響因子:5.66
通訊作者單位:西安交通大學(xué)第一附屬醫(yī)院
含有miRNA結(jié)合位點(diǎn)的miR海綿樣序列被認(rèn)為是潛在的強(qiáng)有力的分子治療策略。天然形成的環(huán)狀RNA(circRNA)在癌細(xì)胞中顯示出了有效的miR海綿起作用。因此該研究推測人造的circRNA樣海綿可以實(shí)現(xiàn)針對特定miR缺失的治療性功能。首先將含有miR-21結(jié)合位點(diǎn)的線性RNA分子在體外轉(zhuǎn)錄;經(jīng)去磷酸化和磷酸化后,使用T4 RNA連接酶1將線性序列5′-3’末端連接實(shí)現(xiàn)環(huán)化。隨后研究者使用RNase R和胎牛血清評估circRNA穩(wěn)定性;使用熒光素酶報告基因,細(xì)胞增殖和細(xì)胞凋亡實(shí)驗(yàn)在三種胃癌細(xì)胞系中評估合成的circRNA海綿對miR-21活性的競爭性抑制能力;還通過Tandem Mass Tag(TMT)標(biāo)記技術(shù)篩查了miR-21下游蛋白質(zhì)的circRNA海綿效應(yīng),進(jìn)一步通過Western blot實(shí)驗(yàn)驗(yàn)證。該研究結(jié)論表明,可以使用簡單的酶促連接步驟合成對RNase R耐受的人工circRNA海綿。circRNA海綿可抑制癌細(xì)胞增殖并抑制miR-21對下游蛋白質(zhì)靶標(biāo)(包括癌癥蛋白質(zhì)DAXX)的活性。人造的circRNA海綿代表了一種簡單,有效,方便的策略,用于在體外實(shí)現(xiàn)特定靶向miR缺失功能,在人類疾病治療中具有潛在應(yīng)用價值。

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圖注:體外人造circRNA sponges流程圖
每個結(jié)合位點(diǎn)序列與miR-21種子區(qū)域完全互補(bǔ)配對,間隔的9-12位序列含有凸起以防止RNAi切割和降解。一個PCR循環(huán)促進(jìn)合成以產(chǎn)生雙鏈DNA PCR片段,然后將其克隆到TOPO PCR克隆載體中。T7 RNA聚合酶結(jié)合到位于PCR插入物5’的T7 RNA聚合酶結(jié)合位點(diǎn)處,產(chǎn)生大量上述miR海綿序列的線性RNA。小牛腸磷酸酶使RNA轉(zhuǎn)錄物的5’末端去磷酸化, T4多核苷酸激酶(在ATP存在下)產(chǎn)生適于連接的RNA分子。最后T4 RNA連接酶孵育將線性RNA環(huán)化,得到人造circRNA sponges。
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文獻(xiàn)列表
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序號 | 主要內(nèi)容 | 論文標(biāo)題 | 雜志 |
IF |
單位 |
1 | 長鏈非編碼RNA-LINC-PINT來源的circRNA編碼多肽抑制膠質(zhì)母細(xì)胞瘤中的癌基因轉(zhuǎn)錄延伸 | A peptide encoded by circular form of LINC-PINT suppresses oncogenic transcriptional elongation in glioblastoma | Nat Commun. | 12.353 | 中山大學(xué)附屬第一醫(yī)院 |
2 | 環(huán)狀RNA-circAGO2通過HuR阻止AGO2-miRNA復(fù)合物形成維持靶基因穩(wěn)定性促進(jìn)腫瘤進(jìn)展 | Circular RNA circAGO2 drives cancer progression through facilitating HuR-repressed functions of AGO2-miRNA complexes | Cell Death Differ. | 8 | 華中科技大學(xué)同濟(jì)醫(yī)學(xué)院 |
3 | 環(huán)狀RNA-ACR通過調(diào)節(jié)Pink1/FAM65B途徑抑制自噬進(jìn)而減輕心肌缺血/再灌注損傷 | The circular RNA ACR attenuates myocardial ischemia/reperfusion injury by suppressing autophagy via modulation of the Pink1/ FAM65B pathway | Cell Death Differ. | 8 | 青島大學(xué)醫(yī)學(xué)院 |
4 | RNA多聚酶II轉(zhuǎn)錄的增強(qiáng)型TuD發(fā)夾狀miRNA吸附分子與ciRS7吸附活性比較 | Enhanced Tailored MicroRNA Sponge Activity of RNA Pol II-Transcribed TuD Hairpins Relative to Ectopically Expressed ciRS7-Derived circRNAs | Mol Ther Nucleic Acids. | 5.66 | 丹麥奧胡斯大學(xué) |
5 | 合成環(huán)狀RNA作為miR-21海綿抑制胃癌細(xì)胞增殖 | Synthetic Circular RNA Functions as a miR-21 Sponge to Suppress Gastric Carcinoma Cell Proliferation | Mol Ther Nucleic Acids. | 5.66 | 西安交通大學(xué)第一附屬醫(yī)院 |
6 | 環(huán)狀RNA-circGprc5a翻譯多肽促進(jìn)膀胱癌進(jìn)展 | Circgprc5a promoted bladder oncogenesis and metastasis through Gprc5a-targeting peptide | Mol Ther Nucleic Acids. | 5.66 | 鄭州大學(xué)第一附屬醫(yī)院 |
7 | circRNA_104075通過調(diào)節(jié)HNF4a刺激YAP依賴性腫瘤發(fā)生,可作為肝細(xì)胞癌的診斷標(biāo)志物 | circRNA_104075 stimulates YAP-dependent tumorigenesis through the regulation of HNF4a and may serve as a diagnostic marker in hepatocellular carcinoma | Cell Death Differ. | 5.638 | 上海同濟(jì)大學(xué)第十人民醫(yī)院 |
8 | Nrf2敲除小鼠的黑質(zhì)和紋狀體中差異表達(dá)的環(huán)狀RNA分析 | The Differentially Expressed Circular RNAs in the Substantia Nigra and Corpus Striatum of Nrf2-Knockout Mice | Cell Physiol Biochem. | 5.5 | 河北醫(yī)科大學(xué) |
9 | 環(huán)狀RNA在口腔鱗狀細(xì)胞癌中的表達(dá) | Circular RNA Expression in Oral Squamous Cell Carcinoma | Front Oncol. | 4.416 | 北京大學(xué)深圳醫(yī)院 |
10 | 在轉(zhuǎn)移性口腔粘膜黑色素瘤中環(huán)狀RNA的表達(dá)模式變化 | Altered expression pattern of circular RNAs in metastatic oral mucosal melanoma | Am J Cancer Res | 3.998 | 上海市第九人民醫(yī)院 |
11 | 綜述:環(huán)狀RNA在心血管疾病中進(jìn)展 | Circular RNA in cardiovascular disease | J Cell Physiol. | 3.923 | 加拿大西部大學(xué) |
12 | Circ-U2AF1通過海綿樣吸附hsa-miR-7-5p去抑制神經(jīng)腫瘤學(xué)腹側(cè)抗原2促進(jìn)人腦膠質(zhì)瘤 | Circ-U2AF1 promotes human glioma via derepressing neuro-oncological ventral antigen 2 by sponging hsa-miR-7-5p | J Cell Physiol. | 3.923 | 南方醫(yī)科大學(xué)珠江醫(yī)院 |
13 | Circ_0058063通過海綿吸附miR-145-5p調(diào)節(jié)CDK6以促進(jìn)膀胱癌進(jìn)展 | Circ_0058063 regulates CDK6 to promote bladder cancer progression by sponging miR-145-5p | J Cell Physiol. | 3.923 | 中國醫(yī)科大學(xué)附屬盛京醫(yī)院 |
14 | 過表達(dá)circ_0067934作為癌基因通過miR-545/EIF3C軸促進(jìn)宮頸癌進(jìn)展 | Overexpressed circ_0067934 acts as an oncogene to facilitate cervical cancer progression via the miR-545/EIF3C axis | J Cell Physiol. | 3.923 | 哈爾濱醫(yī)科大學(xué)附屬第四醫(yī)院 |
15 | 競爭性內(nèi)源性環(huán)狀RNA ADAMTS14通過調(diào)節(jié)鈣調(diào)神經(jīng)蛋白1的microRNA-572 /調(diào)節(jié)因子抑制肝細(xì)胞癌的進(jìn)展 | The competing endogenous circular RNA ADAMTS14 suppressed hepatocellular carcinoma progression through regulating microRNA-572/regulator of calcineurin 1. | J Cell Physiol. | 3.923 | 南京市六合區(qū)中醫(yī)院 |
16 | 綜述:環(huán)狀RNA作為治療試劑和靶標(biāo) | Circular RNAs as Therapeutic Agents and Targets | Front Physiol. | 3.394 | 慕尼黑大學(xué) |
17 | 用于鑒定結(jié)腸直腸癌中共表達(dá)RNA網(wǎng)絡(luò)和特征的差異表達(dá)環(huán)狀RNA的分析 | Analysis of differentially expressed circular RNAs for the identification of a coexpression RNA network and signature in colorectal cancer | J Cell Biochem. | 2.959 | 新鄉(xiāng)醫(yī)科大學(xué) |
18 | Hsa_circ_0008309是口腔鱗狀細(xì)胞癌的潛在生物標(biāo)志物 | Hsa_circ_0008309 May Be a Potential Biomarker for Oral Squamous Cell Carcinoma | Dis Markers | 2.949 | 北京大學(xué)深圳醫(yī)院 |
19 | CircRNA相關(guān)的ceRNA網(wǎng)絡(luò)揭示了下咽癌中的ErbB和Hippo信號通路 | CircRNA-associated ceRNA network reveals ErbB and Hippo signaling pathways in hypopharyngeal cancer | Int J Mol Med. | 2.784 | 昆明醫(yī)科大學(xué)附屬第一醫(yī)院 |
20 | Circ-DLG1促進(jìn)食管鱗狀細(xì)胞癌的增殖 | Circ-DLG1 promotes the proliferation of esophageal squamous cell carcinoma | Onco Targets Ther. | 2.656 | 南京醫(yī)科大學(xué) |
21 | CircRNA has_circ_0078710吸附microRNA-31參與肝細(xì)胞癌進(jìn)展 | CircRNA has_circ_0078710 acts as the sponge of microRNA-31 involved in hepatocellular carcinoma progression | Gene | 2.498 | 中山大學(xué)附屬第一醫(yī)院 |
22 | 高通量測序揭示人類增生性瘢痕中差異表達(dá)的lncRNA和circRNA及其相關(guān)的功能網(wǎng)絡(luò) | Highthroughput sequencing reveals differentially expressed lncRNAs and circRNAs, and their associated functional network, in human hypertrophic scars | Mol Med Rep. | 1.922 | 南昌市婦幼保健院 |
23 | 產(chǎn)氣莢膜梭菌C型誘導(dǎo)仔豬壞死性腸炎模型中脾臟環(huán)狀RNA表達(dá)譜 | Circular RNA expression profile of spleen in a Clostridium perfringens type C-induced piglet model of necrotizing enteritis | FEBS Open Bio. | 1.782 | 蘭州生產(chǎn)工程技術(shù)研究中心 |
來源:geneseed


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